Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015815094.1_cds_XP_016498164.1_12222
CDS Infomation

[gene=LOC107816927] [db_xref=GeneID:107816927] [protein=interactor of constitutive active ROPs 2, chloroplastic-like] [protein_id=XP_016498164.1] [location=join(10180..10199,11157..11337,12218..13822)] [gbkey=CDS]
Sequence

ATGCAGACACCAAAAGCAAGGACTGTTTCTGTGGAGGTGCCACAAAGGACATCTCCTGCT
ACACCAAAGACAACTCGAAAACTCAAGACTCCGGGTTCAGATGCTGATTCTGTTTCATCT
CCAAATCCAGCAACCAGGACACCTAAAGATAGGAGTCCTAAAGTTGTTGGTCGCCGGTCG
CCTCGGAGTCCAGTGATAGAGAAGAAGCGTCCAAGCAAAGTATCCGACTTGGAAGCCCAG
CTTGCTCAACTCCAAGAGGAGCTGAAGAAGGCGAAAGACCAGCTTAATTCTTCTGAATCA
TTGAAGAAAAGGGCTCAACAGGATGCCGATGAAGCCAAAAAGCAGCTCGCCGTCATGTCA
GAAAAGCTCGAGGATTCTAAGAAGCAGCTACTTGAGCTCTCAGATTCAGAGGAAGCTCGA
CTTCTGGAGTTGCGGAAGATCTCACAGGACCGAGACCGAGCATGGGAATCCGAGCTTGAA
GCTATCCAGAAGCAGCATGAGTTGGACTCTGCTGCTTTGGCATCTGCCTTGAATGAAATT
CAGAAACTTAAAATTCAGTTGGACCGAGTGGCCGATTCTGAAGCCACTCAAGCTCATCAT
GCTGAGTCTGCTCACGCTGAGATTCAAAGCTTAAGGGTTGAACTTATGGAGACCCTTACA
TTGGTTGAGAAATTGAGAAACCAGCTTAACGATAGCAAGGAATCCGAGGCTTGTTCGCTT
GAAGAAGTTAGCAAAGCTCAAATGCAGCTTGAAATGTCCAAGATGACTGAGGATACTCTA
CGTTCTGAAGGTCTGAAAGCGATGGACGCCTGCAGAACCTTGTCTTTGGAGTTGGAAAAA
TCAAAGGATCGAGTGGCTTCTTTGGAGGAACTTGTCAGCAAACTCCAGTCTTCAGAAAGT
TCTGTAGCTGCAGAAGGAAATGGCGTAACTGTGGAAGCTGATGAACTAAAAGCTGAGGTA
AGTGAACTAAGAGCTGCTTTAGAGGCTTCCGAGAGAAAGTATCAGGAAGAATACATACAG
AGCACCTTGCAGATAAGAAGTGCTTACGAGCTAGTGGAGCGCACAAAATCTGAATCGACT
CAGAGGGAGGCCGAATGGGAGGCAAAATTAAATGAAACAAAATCTGAAGTGCAAGAGCTA
AAAGAAAAACTGATGAACAAAGAAGCCGAACTGCAAAACATTTCAGATGAGAATAAGGGG
CTAAGTCTGCATGTCGAGCAAATGCAGTCAGCTGATAAAGAGTTTGAACTATCTGCTCAA
CTGAAGCAATCTGAGTCAATTTCGGGAGATCTAAGAGGAAATTTATTAGACAAAGAGAAT
GAGCTGCAGAGTCTTATGGAGGAAAATGAGCTGCTGAAGTCAGAGATCGGAAAGAGGGAA
TCAGAGAGTACCAAAATGAGCGACGAGGCACTTGCCTTAGTAGAAGCGGCAAAAACTGCA
GAAAGTGAGGCTCTAATAAAGCTGGGAGATTTGACTGAGGAAGCAGATAGGAGCAGTAGA
AAGGTAGCACGGGTCACTGAGGAGTTGGATGCAGCACAGACTGCAAACTCAGAGATGGAA
ACCGAGCTGAGGAGGTTAAAAGTGCAATGCGATCAATGGAGAAAGGCTGCTGAAGCAGCT
GCATCTATGCTTTCAGCTGGAAATAACGGGAAATATGTCGAGAGAACAGGTTCTTTAGAC
TACCACACTATAGGCGGAAAGCTTGGTTCTCCACTTTTGGACGACTTGGAAGATGACTCG
CCAAAGAAGAAGAATAACAACATGTTGAAGAGAATTGGTGTTTTATTGAAAAAGGGGCAG
AAGTAA

Peptide Sequence

PEP ID

XP_016498164.1
PEP Infomation

PREDICTED: interactor of constitutive active ROPs 2, chloroplastic-like [Nicotiana tabacum]
Sequence

MQTPKARTVSVEVPQRTSPATPKTTRKLKTPGSDADSVSSPNPATRTPKDRSPKVVGRRS
PRSPVIEKKRPSKVSDLEAQLAQLQEELKKAKDQLNSSESLKKRAQQDADEAKKQLAVMS
EKLEDSKKQLLELSDSEEARLLELRKISQDRDRAWESELEAIQKQHELDSAALASALNEI
QKLKIQLDRVADSEATQAHHAESAHAEIQSLRVELMETLTLVEKLRNQLNDSKESEACSL
EEVSKAQMQLEMSKMTEDTLRSEGLKAMDACRTLSLELEKSKDRVASLEELVSKLQSSES
SVAAEGNGVTVEADELKAEVSELRAALEASERKYQEEYIQSTLQIRSAYELVERTKSEST
QREAEWEAKLNETKSEVQELKEKLMNKEAELQNISDENKGLSLHVEQMQSADKEFELSAQ
LKQSESISGDLRGNLLDKENELQSLMEENELLKSEIGKRESESTKMSDEALALVEAAKTA
ESEALIKLGDLTEEADRSSRKVARVTEELDAAQTANSEMETELRRLKVQCDQWRKAAEAA
ASMLSAGNNGKYVERTGSLDYHTIGGKLGSPLLDDLEDDSPKKKNNNMLKRIGVLLKKGQ
K

Transcript Sequence

Gene sequence data has not been registered.